Kuanqing LIU, Yiheng ZHANG
Received:
2023-08-28
Revised:
2023-11-01
Published:
2023-11-02
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Kuanqing LIU, Yiheng ZHANG
刘宽庆, 张以恒
通讯作者:
刘宽庆,张以恒
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Kuanqing LIU, Yiheng ZHANG. Biological degradation and utilization of lignin[J]. Synthetic Biology Journal, DOI: 10.12211/2096-8280.2023-062.
刘宽庆, 张以恒. 木质素的生物降解和生物利用[J]. 合成生物学, DOI: 10.12211/2096-8280.2023-062.
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URL: https://synbioj.cip.com.cn/EN/10.12211/2096-8280.2023-062
真菌 | 信息来源 | 细菌 | 信息来源 |
---|---|---|---|
Aspergillus flavus | [ | Acinetobacter sp. | [ |
Aspergillus terreus | [ | Amycolatopsis sp. | [ |
Bjerkandera | [ | Aneurinibacillus aneurinilyticus | [ |
Ceriporiopsis subvermispora | [ | Arthrobacter globiformis | [ |
Cyathus stercoreus | [ | Bacillus atrophaeus | [ |
Dichomitus squalens | [ | Bacillus pumilus | [ |
Fusarium oxysporum | [ | Cupriavidus necator | [ |
Gloeophyllum trabeum | [ | Enterobacter lignolyticus | [ |
Lepista nuda | [ | Klebsiella pneumoniae | [ |
Penicillium citrinum | [ | Mycobacterium smegmatis | [ |
Perenniporia medulla-panis | [ | Nocardia autotrophica | [ |
Phanerochaete chrysosporium | [ | Oceanimonas doudoroffii | [ |
Phlebia radiata | [ | Ochrobactrum tritici | [ |
Pleurotus eryngii | [ | Pantoea ananatis | [ |
Pleurotus ostreatus | [ | Pseudomonas putida | [ |
Porodaedalea pini | [ | Rhodococcus erythropolis | [ |
Pycnoporus cinnabarinus | [ | Rhodococcus jostii | [ |
Schizophyllum commune | [ | Sphingomonas paucimobilis | [ |
Serpula lacrymans | [ | Streptomyces coelicolor | [ |
Trametes versicolor | [ | Streptomyces viridosporus | [ |
Tramtes hirsute | [ | ||
Wolfiporia cocos | [ |
Table 1 List of lignin degrading microbes
真菌 | 信息来源 | 细菌 | 信息来源 |
---|---|---|---|
Aspergillus flavus | [ | Acinetobacter sp. | [ |
Aspergillus terreus | [ | Amycolatopsis sp. | [ |
Bjerkandera | [ | Aneurinibacillus aneurinilyticus | [ |
Ceriporiopsis subvermispora | [ | Arthrobacter globiformis | [ |
Cyathus stercoreus | [ | Bacillus atrophaeus | [ |
Dichomitus squalens | [ | Bacillus pumilus | [ |
Fusarium oxysporum | [ | Cupriavidus necator | [ |
Gloeophyllum trabeum | [ | Enterobacter lignolyticus | [ |
Lepista nuda | [ | Klebsiella pneumoniae | [ |
Penicillium citrinum | [ | Mycobacterium smegmatis | [ |
Perenniporia medulla-panis | [ | Nocardia autotrophica | [ |
Phanerochaete chrysosporium | [ | Oceanimonas doudoroffii | [ |
Phlebia radiata | [ | Ochrobactrum tritici | [ |
Pleurotus eryngii | [ | Pantoea ananatis | [ |
Pleurotus ostreatus | [ | Pseudomonas putida | [ |
Porodaedalea pini | [ | Rhodococcus erythropolis | [ |
Pycnoporus cinnabarinus | [ | Rhodococcus jostii | [ |
Schizophyllum commune | [ | Sphingomonas paucimobilis | [ |
Serpula lacrymans | [ | Streptomyces coelicolor | [ |
Trametes versicolor | [ | Streptomyces viridosporus | [ |
Tramtes hirsute | [ | ||
Wolfiporia cocos | [ |
Fig. 3 Primary reactions for utilizing lignin derived aromatics and schematic of assimilating syringate and catechol into microbial metabolic pathways(Enzymatic reactions are mainly based off Erickson et al.[12] and Vaillancourt et al.[53]. Enzymes for assimilating lignin into microbial metabolic pathways may not come from the same species: DesA[54] and LigM[55] from Sphingomonas paucimobilis SYK-6, Dmts[12] from Novosphingobium aromaticivorans DSM 12444, GalA, B, C, D[56-57], CatB[58], CatC[58], PcaI[59], PcaJ[59], and PcaF[59-61] from Pseudomonas putida, CatA[62] from Acinetobacter baylyi, PcaD[63] from Rhodococcus opacus 1CP, and PaaJ [64] from Escherichia coli.)
底物 | 产物 | 底盘细胞 | 参考文献 |
---|---|---|---|
异丁香酚、丁香酚、香草醇、阿魏酸 | 香兰素 | Bacillus pumilus Escherichia coli | [ |
苯甲酸、4-羟基肉桂酸、木质素 | 丙酮酸、乳酸、琥珀酸、衣康酸、酮己二酸 | Phanerochaete chrysosporium Pseudomonas putida | [ |
香兰素、香草酸、苯甲酸、儿茶酚 | 顺,顺-己二烯二酸 | Arthrobacter sp. Brevibacterium flavum Corynebacterium acetoacidophilum Corynebacterium glutamicum Corynebacterium lilium Corynebacterium pseudodiphtheriticum Pseudomonas sp. Pseudomonas putida Sphingobacterium sp. | [ |
儿茶酚 | 聚对苯二甲酸乙二醇酯 | Pseudomonas putida | [ |
木质素 | 脂质 | Rhodococcus opacus | [ |
木质素 | 聚羟基烷酯 | Cupriavidus basilensis Pandoraea sp. Pseudomonas putida | [ |
Table 2 Valorization of lignin and its derived aromatics
底物 | 产物 | 底盘细胞 | 参考文献 |
---|---|---|---|
异丁香酚、丁香酚、香草醇、阿魏酸 | 香兰素 | Bacillus pumilus Escherichia coli | [ |
苯甲酸、4-羟基肉桂酸、木质素 | 丙酮酸、乳酸、琥珀酸、衣康酸、酮己二酸 | Phanerochaete chrysosporium Pseudomonas putida | [ |
香兰素、香草酸、苯甲酸、儿茶酚 | 顺,顺-己二烯二酸 | Arthrobacter sp. Brevibacterium flavum Corynebacterium acetoacidophilum Corynebacterium glutamicum Corynebacterium lilium Corynebacterium pseudodiphtheriticum Pseudomonas sp. Pseudomonas putida Sphingobacterium sp. | [ |
儿茶酚 | 聚对苯二甲酸乙二醇酯 | Pseudomonas putida | [ |
木质素 | 脂质 | Rhodococcus opacus | [ |
木质素 | 聚羟基烷酯 | Cupriavidus basilensis Pandoraea sp. Pseudomonas putida | [ |
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