合成生物学

• 特约评述 •    

ω-氨基酸与内酰胺的生物合成研究进展

刘益宁1,2, 蒲伟3,4, 杨金星5, 王钰1,2   

  1. 1.中国科学院天津工业生物技术研究所,低碳合成工程生物学重点实验室,天津 300308
    2.国家合成生物技术创新中心,天津 300308
    3.内江师范学院,生命科学学院,四川 内江 641100
    4.四川省高等学校特色农业资源研究与利用重点实验室,四川 内江 641100
    5.华南理工大学,生物科学与工程学院,广东 广州 510006
  • 收稿日期:2024-02-04 修回日期:2024-04-25 出版日期:2024-06-24
  • 通讯作者: 王钰
  • 作者简介:刘益宁(1996—),女,硕士,科研助理。研究方向为系统代谢工程与合成生物学。E-mail:liuyn@tib.cas.cn
    蒲伟(1988—),男,博士,讲师。研究方向为系统代谢工程与合成生物学。E-mail:puwei1988@outlook.com
    王钰(1987—),男,博士,研究员,博士生导师。研究方向为工业微生物的基因编辑育种和一碳原料的生物转化利用研究,以第一或通讯作者在Nat Commun、Trends Biotechnol、Nucleic Acids Res、Metab Eng等期刊发表论文40余篇,申请专利40余项。主持国家自然科学基金优秀青年基金、中国科学院关键核心技术攻坚先导专项等项目,获得《麻省理工科技评论》亚太区“35岁以下科技创新35人”、伦世仪教育基金杰出青年学者、日本生物工学会DaSilva Award等荣誉,兼任天津市青联常委、中国化工学会生物化工青年委员会委员、中国生物工程学会青年工作委员会和一碳生物技术专委会委员、中国遗传学会微生物遗传专委会委员、天津微生物学会理事、中国科学院青年创新促进会生命分会副会长等。E-mail:wang_y@tib.cas.cn
    第一联系人:共同第一作者
  • 基金资助:
    中国科学院关键核心技术攻坚先导专项(XDC0110201)

Recent advances in the biosynthesis of ω-amino acids and lactams

Yining LIU1,2, Wei PU3,4, Jinxing YANG5, Yu WANG1,2   

  1. 1.Key Laboratory of Engineering Biology for Low-Carbon Manufacturing,Tianjin Institute of Industrial Biotechnology,Chinese Academy of Sciences,Tianjin 300308,China
    2.National Technology Innovation Center of Synthetic Biology,Tianjin 300308,China
    3.Life Science of School,Neijiang Normal University,Neijiang 641100,Sichuan,China
    4.Key Laboratory of Regional Characteristic Agricultural Resources in Sichuan Province,Neijiang 641100,Sichuan,China
    5.School of Biology and Biological Engineering,South China University of Technology,Guangzhou 510006,Guangdong,China
  • Received:2024-02-04 Revised:2024-04-25 Online:2024-06-24
  • Contact: Yu WANG

摘要:

以可再生碳资源为原料,以工程微生物为核心工具,通过生物制造的方式生产生物基材料等化学品,具有绿色、低碳的优势,已经成为目前研究的热点。ω-氨基酸是氨基和羧基分别位于支链碳链两端的一种非天然氨基酸,其自身环化的产物内酰胺是合成聚酰胺材料(又名尼龙)的关键单体。聚酰胺材料具有广泛的应用与巨大的市场,目前主要通过石化路线生产,生物合成路线仍处于研究阶段,但是近年来进展迅速。本文系统介绍了ω-氨基酸与内酰胺的生物合成研究进展。为合成生物基聚酰胺材料,研究者设计了ω-氨基酸的人工合成途径,挖掘了可环化ω-氨基酸合成内酰胺的关键酶,通过在微生物底盘细胞中组装合成途径,调控和优化代谢流量,开发内酰胺生物传感器并进行高通量筛选,实现了C4—C6的ω-氨基酸和内酰胺的生物合成。尤其以葡萄糖为原料合成戊内酰胺的产量超过70 g/L,生产强度达到约1 g/L·h,接近可工业化的水平。最后,本文也讨论了目前ω-氨基酸与内酰胺生物合成面临的途径原子经济性低、关键环化酶限速、一碳等非粮原料开发利用不足等挑战。

关键词: ω-氨基酸, 内酰胺, 聚酰胺, 生物基材料, 生物合成

Abstract:

Increasing petroleum consumption and growing environmental concerns necessitate the sustainable production of chemicals and fuels from renewable resources. By utilizing renewable resources as raw materials and engineered microorganisms as the core tools, the bio-manufacturing of bio-based materials has become a hot research topic due to its green and low-carbon advantages. ω-Amino acids are a type of non-natural amino acids with amino and carboxyl groups located at the ends of the straight carbon chain. Self-cyclization of ω-amino acids produce lactams, which are the key monomers for the synthesis of polyamide materials, commonly known as nylon. Polyamide materials have wide applications and a huge global market over seven million tons per year. Nowdays, polyamide materials and their monomers are primarily produced through petrochemical routes with non-renewable resources. The research on biosynthesis of these materials and monomers is still in the early stages, but significant progress has been made in recent years. This review article systematically introduces the recent advances in the biosynthesis of ω-amino acids and lactams. To achieve the bio-manufacturing of bio-based polyamide materials, researchers have designed artificial biosynthetic pathways for ω-amino acids from renewable carbon sources such as glucose. The key enzymes for the cyclization of ω-amino acids to form lactams have been identified. By assembling the biosynthetic pathway in microbial chassis such as Escherichia coli and Corynebacterium glutamicum, production of ω-amino acids and lactams have been achieved. Furthermore, the metabolic flux was fine-tuned by regulating and optimizing the expression of key genes to improve the biosynthesis of ω-amino acids and lactams. Besides, biosensors of lactams have been developed to transfer the intracellular concentrations of lactams into easily detectable signals such as fluorescence. Such biosensors have been successfully used for high-throughput screening of ω-amino acid cyclization enzymes and dynamic regulation of biosynthetic pathway. These effects have resulted in the successful biosynthesis of C4-C6 ω-amino acids and lactams. Particularly, using glucose as a raw material, the production of valerolactam by fed-batch fermentation exceeded 70 g/L, with a productivity of about 1 g/L·h, which approaches the level required for industrialization and commercialization. Finally, the review article discusses the current challenges faced in the biosynthesis of ω-amino acids and lactams, including the low yield of biosynthetic pathways, rate-limitations posed by key cyclization enzymes, and insufficient utilization of non-food carbon sources such as one-carbon compounds.

Key words: ω-amino acid, lactam, polyamide, bio-based material, biosynthesis

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