Synthetic Biology Journal ›› 2022, Vol. 3 ›› Issue (5): 870-883.DOI: 10.12211/2096-8280.2022-019
• Invited Review • Previous Articles Next Articles
Yangyang SHENG, Xiumei XU, Qiaohong ZHANG, Lixin ZHANG
Received:
2022-04-02
Revised:
2022-06-29
Online:
2022-11-16
Published:
2022-10-31
Contact:
Lixin ZHANG
盛阳阳, 徐秀美, 张巧红, 张立新
通讯作者:
张立新
作者简介:
CLC Number:
Yangyang SHENG, Xiumei XU, Qiaohong ZHANG, Lixin ZHANG. Advances in synthetic biology for photosynthetic carbon assimilation[J]. Synthetic Biology Journal, 2022, 3(5): 870-883.
盛阳阳, 徐秀美, 张巧红, 张立新. 光合作用碳同化的合成生物学研究进展[J]. 合成生物学, 2022, 3(5): 870-883.
Add to citation manager EndNote|Ris|BibTeX
URL: https://synbioj.cip.com.cn/EN/10.12211/2096-8280.2022-019
提高Rubisco酶的羧化活性 | 研究策略 | 参考文献 |
---|---|---|
寻找其他物种中高活性的Rubisco酶 | 高羧化酶活性 | [ |
高亲和力 | [ | |
筛选Rubisco酶高活性品种 | 高羧化酶活性 | [ |
人工合成肽 | 无明显作用 | [ |
引进Rubisco生物合成依赖的辅助因子 | 折叠伴侣蛋白、组装伴侣蛋白及活化酶 | [ |
Tab. 1 Summary of Rubisco enzyme activity by synthetic biological research
提高Rubisco酶的羧化活性 | 研究策略 | 参考文献 |
---|---|---|
寻找其他物种中高活性的Rubisco酶 | 高羧化酶活性 | [ |
高亲和力 | [ | |
筛选Rubisco酶高活性品种 | 高羧化酶活性 | [ |
人工合成肽 | 无明显作用 | [ |
引进Rubisco生物合成依赖的辅助因子 | 折叠伴侣蛋白、组装伴侣蛋白及活化酶 | [ |
引进CO2浓缩机制 | 研究策略 | 参考文献 |
---|---|---|
GLK基因的引入 | 促进产量增加 | [ |
转运蛋白的引入 | 条件促进,可以提高光合速率和碳同化率 | [ |
蓝藻羧酶体的引入 | 有待进一步探索研究 | [ |
Tab. 2 Summary of CO2 enrichment mechanisms by synthetic biological research
引进CO2浓缩机制 | 研究策略 | 参考文献 |
---|---|---|
GLK基因的引入 | 促进产量增加 | [ |
转运蛋白的引入 | 条件促进,可以提高光合速率和碳同化率 | [ |
蓝藻羧酶体的引入 | 有待进一步探索研究 | [ |
降低光呼吸 | 研究策略 | 参考文献 |
---|---|---|
叶绿体甘油酸支路 | 叶绿体乙醇酸转化为甘油酸,生物量增加,无NH3的释放 | [ |
过氧化物酶体甘油酸支路 | 绕过了线粒体中的甘氨酸到丝氨酸的转化,同时将CO2释放的位置从线粒体转移到过氧化物酶体,无NH3的释放 | [ |
叶绿体乙醇酸氧化支路 | 光呼吸途径的碳全部丢失,无NH3的释放 | [ |
3-羟基丙酸盐支路 | 实现光呼吸期间CO2的净同化,无NH3的释放 | [ |
Tab. 3 Summary of photorespiration pathways by synthetic biological research
降低光呼吸 | 研究策略 | 参考文献 |
---|---|---|
叶绿体甘油酸支路 | 叶绿体乙醇酸转化为甘油酸,生物量增加,无NH3的释放 | [ |
过氧化物酶体甘油酸支路 | 绕过了线粒体中的甘氨酸到丝氨酸的转化,同时将CO2释放的位置从线粒体转移到过氧化物酶体,无NH3的释放 | [ |
叶绿体乙醇酸氧化支路 | 光呼吸途径的碳全部丢失,无NH3的释放 | [ |
3-羟基丙酸盐支路 | 实现光呼吸期间CO2的净同化,无NH3的释放 | [ |
Fig. 2 Natural and synthetic photorespiratory bypassesBlack arrow, classic photorespiratory bypass; Blue arrow, chloroplastic glycerate bypass; Orange arrow, peroxisomal glycerate bypass; Green arrow, chloroplastic glycolate oxidation bypass; Purple arrow, 3-hydroxypropionate bypass; Red arrow, A new photorespiratory bypasses in riceRUBP—Ribulose 1,5-bisphosphate; G2P—2-phosphoglyceric acid; 3-PGA—3-phosphoglyceric acid
1 | SILVIA M. Agriculture has to increase production by 70%: FAO chief[EB/OL]. [2009-10-14]. . |
2 | TILMAN D, CASSMAN K G, MATSON P A, et al. Agricultural sustainability and intensive production practices[J]. Nature, 2002, 418(6898): 671-677. |
3 | MAURINO V G, WEBER A P M. Engineering photosynthesis in plants and synthetic microorganisms[J]. Journal of Experimental Botany, 2012, 64(3): 743-751. |
4 | WHITNEY S M, HOUTZ R L, ALONSO H. Advancing our understanding and capacity to engineer nature's CO2-sequestering enzyme, Rubisco[J]. Plant Physiology, 2010, 155(1): 27-35. |
5 | ZHU X G, LONG S P, ORT D R. Improving photosynthetic efficiency for greater yield[J]. Annual Review of Plant Biology, 2010, 61: 235-261. |
6 | 程建峰, 沈允钢. 试析光合作用的研究动向[J]. 植物学报, 2011, 46(6): 694-704. |
CHENG J F, SHEN Y G. On the trends of photosynthesis research[J]. Chinese Bulletin of Botany, 2011, 46(6): 694-704. | |
7 | 朱观林, 郭龙彪, 钱前. 水稻的高光效分子育种[J]. 中国稻米, 2009, 15(5): 5-10. |
ZHU G L, GUO L B, QIAN Q. Molecular breeding of rice with high light efficiency[J]. China Rice, 2009, 15(5): 5-10. | |
8 | 张立新, 卢从明, 彭连伟, 等. 利用合成生物学原理提高光合作用效率的研究进展[J]. 生物工程学报, 2017, 33(3): 486-493. |
ZHANG L X, LU C M, PENG L W, et al. Progress in improving photosynthetic efficiency by synthetic biology[J]. Chinese Journal of Biotechnology, 2017, 33(3): 486-493. | |
9 | 程建峰, 沈允钢. 作物高光效之管见[J]. 作物学报, 2010, 36(8): 1235-1247. |
CHENG J F, SHEN Y G. My humble opinions on high photosynthetic efficiency of crop[J]. Acta Agronomica Sinica, 2010, 36(8): 1235-1247. | |
10 | 张春霆. 合成生物学: 我国急需发展的前沿科学[J]. 前沿科学, 2007, 1(3): 55. |
ZHANG C T. Synthetic biology: frontier science in urgent need of development in China[J]. Frontier Science, 2007, 1(3): 55. | |
11 | DRUBIN D A, WAY J C, SILVER P A. Designing biological systems[J]. Genes & Development, 2007, 21(3): 242-254. |
12 | 熊燕, 陈大明, 杨琛, 等. 合成生物学发展现状与前景[J]. 生命科学, 2011, 23(9): 826-837. |
XIONG Y, CHEN D M, YANG C, et al. Progress and perspective of synthetic biology[J]. Chinese Bulletin of Life Sciences, 2011, 23(9): 826-837. | |
13 | STEEN E J, KANG Y S, BOKINSKY G, et al. Microbial production of fatty-acid-derived fuels and chemicals from plant biomass[J]. Nature, 2010, 463(7280):559-563. |
14 | DEKISHIMA Y, LAN E I, SHEN C R, et al. Extending carbon chain length of 1-butanol pathway for 1-hexanol synthesis from glucose by engineered Escherichia coli [J]. Journal of the American Chemical Society, 2011, 133(30):11399-11401. |
15 | MAHISHI L H, TRIPATHI G, RAWAL S K. Poly(3-hydroxybutyrate) (PHB) synthesis by recombinant Escherichia coli harbouring Streptomyces aureofaciens PHB biosynthesis genes: effect of various carbon and nitrogen sources[J]. Microbiological Research, 2003, 158(1): 19-27. |
16 | YANG T H, KIM T W, KANG H O, et al. Biosynthesis of polylactic acid and its copolymers using evolved propionate CoA transferase and PHA synthase[J]. Biotechnology and Bioengineering, 2010, 105(1): 150-160. |
17 | AJIKUMAR P K, XIAO W H, TYO K E J, et al. Isoprenoid pathway optimization for taxol precursor overproduction in Escherichia coli [J]. Science, 2010, 330(6000): 70-74. |
18 | LEVSKAYA A, CHEVALIER A A, TABOR J J, et al. Engineering Escherichia coli to see light[J]. Nature, 2005, 438(7067): 441-442. |
19 | TOPP S, GALLIVAN J P. Riboswitches in unexpected places - a synthetic riboswitch in a protein coding region[J]. RNA, 2008, 14(12): 2498-2503. |
20 | WERLEN C, JASPERS M C M, VAN DER MEER J R. Measurement of biologically available naphthalene in gas and aqueous phases by use of a Pseudomonas putida biosensor[J]. Applied and Environmental Microbiology, 2004, 70(1): 43-51. |
21 | ATSUMI S, HANAI T, LIAO J C. Non-fermentative pathways for synthesis of branched-chain higher alcohols as biofuels[J]. Nature, 2008, 451(7174): 86-89. |
22 | ZHANG K C, SAWAYA M R, EISENBERG D S, et al. Expanding metabolism for biosynthesis of nonnatural alcohols[J]. Proceedings of the National Academy of Sciences of the United States of America, 2008, 105(52): 20653-20658. |
23 | SHEN C R, LAN E I, DEKISHIMA Y, et al. Driving forces enable high-titer anaerobic 1-butanol synthesis in Escherichia coli [J]. Applied and Environmental Microbiology, 2011, 77(9): 2905-2915. |
24 | HANANIA U, ARIEL T, TEKOAH Y, et al. Establishment of a tobacco BY2 cell line devoid of plant-specific xylose and fucose as a platform for the production of biotherapeutic proteins[J]. Plant Biotechnology Journal, 2017, 15(9): 1120-1129. |
25 | ČERMÁK T, CURTIN S J, GIL-HUMANES J, et al. A multipurpose toolkit to enable advanced genome engineering in plants[J]. The Plant Cell, 2017, 29(6): 1196-1217. |
26 | PARRY M A J, KEYS A J, MADGWICK P J, et al. Rubisco regulation: a role for inhibitors[J]. Journal of Experimental Botany, 2008, 59(7): 1569-1580. |
27 | ANDERSSON I, BACKLUND A. Structure and function of Rubisco[J]. Plant Physiology and Biochemistry, 2008, 46(3): 275-291. |
28 | ANDERSSON I. Catalysis and regulation in Rubisco[J]. Journal of Experimental Botany, 2008, 59(7): 1555-1568. |
29 | WHITNEY S M, BALDET P, HUDSON G S, et al. Form I Rubiscos from non-green algae are expressed abundantly but not assembled in tobacco chloroplasts[J]. The Plant Journal: for Cell and Molecular Biology, 2001, 26(5): 535-547. |
30 | LIN M T, OCCHIALINI A, ANDRALOJC P J, et al. A faster Rubisco with potential to increase photosynthesis in crops[J]. Nature, 2014, 513(7519): 547-550. |
31 | ZHU X G, PORTIS A R, LONG S P. Would transformation of C3 crop plants with foreign Rubisco increase productivity? A computational analysis extrapolating from kinetic properties to canopy photosynthesis[J]. Plant, Cell and Environment, 2004, 27(2): 155-165. |
32 | MATSUMURA H, SHIOMI K, YAMAMOTO A, et al. Hybrid Rubisco with complete replacement of rice Rubisco small subunits by sorghum counterparts confers C4 plant-like high catalytic activity[J]. Molecular Plant, 2020, 13(11): 1570-1581. |
33 | PRINS A, ORR D J, ANDRALOJC P J, et al. Rubisco catalytic properties of wild and domesticated relatives provide scope for improving wheat photosynthesis[J]. Journal of Experimental Botany, 2016, 67(6): 1827-1838. |
34 | WHITNEY S M, KANE H J, HOUTZ R L, et al. Rubisco oligomers composed of linked small and large subunits assemble in tobacco plastids and have higher affinities for CO2 and O2 [J]. Plant Physiology, 2009, 149(4): 1887-1895. |
35 | DURÃO P, AIGNER H, NAGY P, et al. Opposing effects of folding and assembly chaperones on evolvability of Rubisco[J]. Nature Chemical Biology, 2015, 11(2): 148-155. |
46 | GUTTERIDGE S, GATENBY A A. Rubisco synthesis, assembly, mechanism, and regulation[J]. The Plant Cell, 1995, 7(7): 809-819. |
37 | QU Y C, SAKODA K, FUKAYAMA H, et al. Overexpression of both Rubisco and Rubisco activase rescues rice photosynthesis and biomass under heat stress[J]. Plant, Cell & Environment, 2021, 44(7): 2308-2320. |
38 | KANEVSKI I, MALIGA P, RHOADES D F, et al. Plastome engineering of ribulose-1,5-bisphosphate carboxylase/oxygenase in tobacco to form a sunflower large subunit and tobacco small subunit hybrid[J]. Plant Physiology, 1999, 119(1): 133-142. |
39 | WHITNEY S M, ANDREWS T J. Plastome-encoded bacterial ribulose-1,5-bisphosphate carboxylase/oxygenase (RubisCO) supports photosynthesis and growth in tobacco[J]. Proceedings of the National Academy of Sciences of the United States of America, 2001, 98(25): 14738-14743. |
40 | ISHIKAWA C, HATANAKA T, MISOO S, et al. Functional incorporation of sorghum small subunit increases the catalytic turnover rate of Rubisco in transgenic rice[J]. Plant Physiology, 2011, 156(3): 1603-1611. |
41 | MARTIN-AVILA E, LIM Y L, BIRCH R, et al. Modifying plant photosynthesis and growth via simultaneous chloroplast transformation of Rubisco large and small subunits[J]. The Plant Cell, 2020, 32(9): 2898-2916. |
42 | PARRY M A J, ANDRALOJC P J, MITCHELL R A C, et al. Manipulation of Rubisco: the amount, activity, function and regulation[J]. Journal of Experimental Botany, 2003, 54(386): 1321-1333. |
43 | SPREITZER R J, SALVUCCI M E. Rubisco: structure, regulatory interactions, and possibilities for a better enzyme[J]. Annual Review of Plant Biology, 2002, 53: 449-475. |
44 | PORTIS A R JR. Rubisco activase-rubisco's catalytic chaperone[J]. Photosynthesis Research, 2003, 75(1): 11-27. |
45 | 张国, 王玮, 邹琦. Rubisco活化酶的分子生物学[J]. 植物生理学通讯, 2004, 40(5): 633-637. |
ZHANG G, WANG W, ZOU Q. Molecular biology of rubisco activase[J]. Plant Physiology Communications, 2004, 40(5): 633-637. | |
46 | REITH M, CATTOLICO R A. Inverted repeat of Olisthodiscus luteus chloroplast DNA contains genes for both subunits of ribulose-1, 5-bisphosphate carboxylase and the 32,000-dalton QB protein: phylogenetic implications[J]. Proceedings of the National Academy of Sciences of the United States of America, 1986, 83(22): 8599-8603. |
47 | DELWICHE C F, PALMER J D. Rampant horizontal transfer and duplication of Rubisco genes in eubacteria and plastids[J]. Molecular Biology and Evolution, 1996, 13(6): 873-882. |
48 | TABITA F R. Microbial ribulose 1,5-bisphosphate carboxylase/oxygenase: a different perspective[J]. Photosynthesis Research, 1999, 60(1):1-28. |
49 | JOSHI J, MUELLER-CAJAR O, TSAI Y C C, et al. Role of small subunit in mediating assembly of red-type form I Rubisco[J]. Journal of Biological Chemistry, 2015, 290(2): 1066-1074. |
50 | GUNN L H, MARTIN AVILA E, BIRCH R, et al. The dependency of red Rubisco on its cognate activase for enhancing plant photosynthesis and growth[J]. Proceedings of the National Academy of Sciences of the United States of America, 2020, 117(41): 25890-25896. |
51 | SALESSE-SMITH C E, SHARWOOD R E, BUSCH F A, et al. Overexpression of Rubisco subunits with RAF1 increases Rubisco content in maize[J]. Nature Plants, 2018, 4(10): 802-810. |
52 | WHITNEY S M, BIRCH R, KELSO C, et al. Improving recombinant Rubisco biogenesis, plant photosynthesis and growth by coexpressing its ancillary RAF1 chaperone[J]. Proceedings of the National Academy of Sciences of the United States of America, 2015, 112(11): 3564-3569. |
53 | FLECKEN M, WANG H P, POPILKA L, et al. Dual functions of a Rubisco activase in metabolic repair and recruitment to carboxysomes[J]. Cell, 2020, 183(2): 457-473.e20. |
54 | SASCHENBRECKER S, BRACHER A, RAO K V, et al. Structure and function of RbcX, an assembly chaperone for hexadecameric rubisco[J]. Cell, 2007, 129(6): 1189-1200. |
55 | XIA L Y, JIANG Y L, KONG W W, et al. Molecular basis for the assembly of RuBisCO assisted by the chaperone Raf1[J]. Nature Plants, 2020, 6(6): 708-717. |
56 | HUANG F, KONG W W, SUN Y Q, et al. Rubisco accumulation factor 1 (Raf1) plays essential roles in mediating Rubisco assembly and carboxysome biogenesis[J]. Proceedings of the National Academy of Sciences of the United States of America, 2020, 117(29): 17418-17428. |
57 | PARRY M A J, ANDRALOJC P J, SCALES J C, et al. Rubisco activity and regulation as targets for crop improvement[J]. Journal of Experimental Botany, 2012, 64(3): 717-730. |
58 | CAI Z, LIU G X, ZHANG J L, et al. Development of an activity-directed selection system enabled significant improvement of the carboxylation efficiency of Rubisco[J]. Protein & Cell, 2014, 5(7): 552-562. |
59 | RAVEN J A, COCKELL C S, DE LA ROCHA C L. The evolution of inorganic carbon concentrating mechanisms in photosynthesis[J]. Philosophical Transactions of the Royal Society of London Series B, Biological Sciences, 2008, 363(1504): 2641-2650. |
60 | LANGDALE J A. C4 cycles: past, present, and future research on C4 photosynthesis[J]. The Plant Cell, 2011, 23(11): 3879-3892. |
61 | KLAVSEN S K, MADSEN T V, MABERLY S C. Crassulacean acid metabolism in the context of other carbon-concentrating mechanisms in freshwater plants: a review[J]. Photosynthesis Research, 2011, 109(1/2/3): 269-279. |
62 | VON CAEMMERER S, QUICK W P, FURBANK R T. The development of C₄ rice: current progress and future challenges[J]. Science, 2012, 336(6089): 1671-1672. |
63 | LONG S P, MARSHALL-COLON A, ZHU X G. Meeting the global food demand of the future by engineering crop photosynthesis and yield potential[J]. Cell, 2015, 161(1): 56-66. |
64 | MIYAO M, MASUMOTO C, MIYAZAWA S I, et al. Lessons from engineering a single-cell C4 photosynthetic pathway into rice[J]. Journal of Experimental Botany, 2011, 62(9): 3021-3029. |
65 | WANG P, KHOSHRAVESH R, KARKI S, et al. Re-creation of a key step in the evolutionary switch from C3 to C4 leaf anatomy[J]. Current Biology, 2017, 27(21): 3278-3287.e6. |
66 | YEH S Y, LIN H H, CHANG Y M, et al. Maize Golden2-like transcription factors boost rice chloroplast development, photosynthesis, and grain yield[J]. Plant Physiology, 2021, 188(1): 442-459. |
67 | MCGRATH J M, LONG S P. Can the cyanobacterial carbon-concentrating mechanism increase photosynthesis in crop species? A theoretical analysis[J]. Plant Physiology, 2014, 164(4): 2247-2261. |
68 | YANG S M, CHANG C Y, YANAGISAWA M, et al. Transgenic rice expressing cyanobacterial bicarbonate transporter exhibited enhanced photosynthesis, growth and grain yield[J]. Photosynthesis Energy from the Sun, 2008:1247-1250. |
69 | HAY W T, BIHMIDINE S, MUTLU N, et al. Enhancing soybean photosynthetic CO2 assimilation using a cyanobacterial membrane protein, ictB [J]. Journal of Plant Physiology, 2017, 212: 58-68. |
70 | ROLLAND V, BADGER M R, PRICE G D. Redirecting the cyanobacterial bicarbonate transporters BicA and SbtA to the chloroplast envelope: soluble and membrane cargos need different chloroplast targeting signals in plants[J]. Frontiers in Plant Science, 2016, 7: 185. |
71 | UEHARA S, ADACHI F, ITO-INABA Y, et al. Specific and efficient targeting of cyanobacterial bicarbonate transporters to the inner envelope membrane of chloroplasts in Arabidopsis [J]. Frontiers in Plant Science, 2016, 7: 16. |
72 | ATKINSON N, FEIKE D, MACKINDER L C M, et al. Introducing an algal carbon-concentrating mechanism into higher plants: location and incorporation of key components[J]. Plant Biotechnology Journal, 2016, 14(5): 1302-1315. |
73 | BADGER M R, HANSON D, PRICE G D. Evolution and diversity of CO2 concentrating mechanisms in cyanobacteria[J]. Functional Plant Biology: FPB, 2002, 29(3): 161-173. |
74 | LONG B M, RAE B D, ROLLAND V, et al. Cyanobacterial CO2-concentrating mechanism components: function and prospects for plant metabolic engineering[J]. Current Opinion in Plant Biology, 2016, 31: 1-8. |
75 | RAE B D, LONG B M, BADGER M R, et al. Functions, compositions, and evolution of the two types of carboxysomes: polyhedral microcompartments that facilitate CO2 fixation in cyanobacteria and some proteobacteria[J]. Microbiology and Molecular Biology Reviews: MMBR, 2013, 77(3): 357-379. |
76 | LONG B M, BADGER M R, WHITNEY S M, et al. Analysis of carboxysomes from Synechococcus PCC7942 reveals multiple Rubisco complexes with carboxysomal proteins CcmM and CcaA[J]. Journal of Biological Chemistry, 2007, 282(40): 29323-29335. |
77 | PRICE G D, BADGER M R, WOODGER F J, et al. Advances in understanding the cyanobacterial CO2-concentrating-mechanism (CCM): functional components, Ci transporters, diversity, genetic regulation and prospects for engineering into plants[J]. Journal of Experimental Botany, 2007, 59(7): 1441-1461. |
78 | PRICE G D. Inorganic carbon transporters of the cyanobacterial CO2 concentrating mechanism[J]. Photosynthesis Research, 2011, 109(1/2/3): 47-57. |
79 | SHIVELY J M, BALL F, BROWN D H, et al. Functional organelles in prokaryotes: polyhedral inclusions (carboxysomes) of Thiobacillus neapolitanus [J]. Scientific Reports, 1973, 182(4112): 584-586. |
80 | CANNON G C, HEINHORST S, KERFELD C A. Carboxysomal carbonic anhydrases: structure and role in microbial CO2 fixation[J]. Biochimica et Biophysica Acta (BBA)-Proteins and Proteomics, 2010, 1804(2): 382-392. |
81 | SO A K C, ESPIE G S, WILLIAMS E B, et al. A novel evolutionary lineage of carbonic anhydrase (ε class) is a component of the carboxysome shell[J]. Journal of Bacteriology, 2004, 186(3): 623-630. |
82 | MANGAN N M, FLAMHOLZ A, HOOD R D, et al. pH determines the energetic efficiency of the cyanobacterial CO2 concentrating mechanism[J]. Proceedings of the National Academy of Sciences of the United States of America, 2016, 113(36): E5354-E5362. |
83 | GONZALEZ-ESQUER C R, SHUBITOWSKI T B, KERFELD C A. Streamlined construction of the cyanobacterial CO2-fixing organelle via protein domain fusions for use in plant synthetic biology[J]. The Plant Cell, 2015, 27(9): 2637-2644. |
84 | LIN M T, OCCHIALINI A, ANDRALOJC P J, et al. β-Carboxysomal proteins assemble into highly organized structures in Nicotiana chloroplasts[J]. The Plant Journal, 2014, 79(1): 1-12. |
85 | BONACCI W, TENG P K, AFONSO B, et al. Modularity of a carbon-fixing protein organelle[J]. Proceedings of the National Academy of Sciences of the United States of America, 2012, 109(2): 478-483. |
86 | PENGELLY J J L, FÖRSTER B, VON CAEMMERER S, et al. Transplastomic integration of a cyanobacterial bicarbonate transporter into tobacco chloroplasts[J]. Journal of Experimental Botany, 2014, 65(12): 3071-3080. |
87 | LONG B M, HEE W Y, SHARWOOD R E, et al. Carboxysome encapsulation of the CO2-fixing enzyme Rubisco in tobacco chloroplasts[J]. Nature Communications, 2018, 9: 3570. |
88 | HANSON M R, LIN M T, CARMO-SILVA A E, et al. Towards engineering carboxysomes into C3 plants[J]. The Plant Journal: for Cell and Molecular Biology, 2016, 87(1): 38-50. |
89 | TCHERKEZ G. The mechanism of Rubisco-catalysed oxygenation[J]. Plant, Cell & Environment, 2016, 39(5): 983-997. |
90 | MAURINO V G, PETERHANSEL C. Photorespiration: current status and approaches for metabolic engineering[J]. Current Opinion in Plant Biology, 2010, 13(3): 248-255. |
91 | PETERHANSEL C, MAURINO V G. Photorespiration redesigned[J]. Plant Physiology, 2010, 155(1): 49-55. |
92 | FIELD C B, BEHRENFELD M J, RANDERSON J T, et al. Primary production of the biosphere: integrating terrestrial and oceanic components[J]. Science, 1998, 281(5374): 237-240. |
93 | GIORDANO M, BEARDALL J, RAVEN J A. CO2 concentrating mechanisms in algae: mechanisms, environmental modulation, and evolution[J]. Annual Review of Plant Biology, 2005, 56: 99-131. |
94 | WINGLER A, LEA P J, QUICK W P, et al. Photorespiration: metabolic pathways and their role in stress protection[J]. Philosophical Transactions of the Royal Society B, 2000, 355(1402): 1517-1529. |
95 | SOUTH P F, CAVANAGH A P, LIU H W, et al. Synthetic glycolate metabolism pathways stimulate crop growth and productivity in the field[J]. Science, 2019, 363(6422): eaat9077. |
96 | TIMM S, NUNES-NESI A, PÄRNIK T, et al. A cytosolic pathway for the conversion of hydroxypyruvate to glycerate during photorespiration in Arabidopsis [J]. The Plant Cell, 2008, 20(10): 2848-2859. |
97 | AHMAD R, BILAL M, JEON J H, et al. Improvement of biomass accumulation of potato plants by transformation of cyanobacterial photorespiratory glycolate catabolism pathway genes[J]. Plant Biotechnology Reports, 2016, 10(5): 269-276. |
98 | DE F C CARVALHO J, MADGWICK P J, POWERS S J, et al. An engineered pathway for glyoxylate metabolism in tobacco plants aimed to avoid the release of ammonia in photorespiration[J]. BMC Biotechnology, 2011, 11: 111. |
99 | MAIER A, FAHNENSTICH H, VON CAEMMERER S, et al. Transgenic introduction of a glycolate oxidative cycle into A. thaliana chloroplasts leads to growth improvement[J]. Frontiers in Plant Science, 2012, 3: 38. |
100 | KEBEISH R, NIESSEN M, THIRUVEEDHI K, et al. Chloroplastic photorespiratory bypass increases photosynthesis and biomass production in Arabidopsis thaliana [J]. Nature Biotechnology, 2007, 25(5): 593-599. |
101 | SHIH P M, ZARZYCKI J, NIYOGI K K, et al. Introduction of a synthetic CO2-fixing photorespiratory bypass into a Cyanobacterium[J]. Journal of Biological Chemistry, 2014, 289(14): 9493-9500. |
102 | ERB T J, ZARZYCKI J. Biochemical and synthetic biology approaches to improve photosynthetic CO2-fixation[J]. Current Opinion in Chemical Biology, 2016, 34: 72-79. |
103 | DALAL J, LOPEZ H, VASANI N B, et al. A photorespiratory bypass increases plant growth and seed yield in biofuel crop Camelina sativa [J]. Biotechnology for Biofuels, 2015, 8: 175. |
104 | NÖLKE G, HOUDELET M, KREUZALER F, et al. The expression of a recombinant glycolate dehydrogenase polyprotein in potato (Solanum tuberosum) plastids strongly enhances photosynthesis and tuber yield[J]. Plant Biotechnology Journal, 2014, 12(6): 734-742. |
105 | FAHNENSTICH H, SCARPECI T E, VALLE E M, et al. Generation of hydrogen peroxide in chloroplasts of Arabidopsis overexpressing glycolate oxidase as an inducible system to study oxidative stress[J]. Plant Physiology, 2008, 148(2): 719-729. |
106 | OLIVER D J. The effect of glyoxylate on photosynthesis and photorespiration by isolated soybean mesophyll cells[J]. Plant Physiology, 1980, 65(5): 888-892. |
107 | XIN C P, THOLEN D, DEVLOO V, et al. The benefits of photorespiratory bypasses: how can they work? [J]. Plant Physiology, 2014, 167(2): 574-585. |
108 | PETERHANSEL C, BLUME C, OFFERMANN S. Photorespiratory bypasses: how can they work? [J]. Journal of Experimental Botany, 2012, 64(3): 709-715. |
109 | BETTI M, BAUWE H, BUSCH F A, et al. Manipulating photorespiration to increase plant productivity: recent advances and perspectives for crop improvement[J]. Journal of Experimental Botany, 2016, 67(10): 2977-2988. |
110 | SAGE T L, SAGE R F. The functional anatomy of rice leaves: implications for refixation of photorespiratory CO2 and efforts to engineer C4 photosynthesis into rice[J]. Plant and Cell Physiology, 2009, 50(4): 756-772. |
111 | BUSCH F A, SAGE T L, COUSINS A B, et al. C3 plants enhance rates of photosynthesis by reassimilating photorespired and respired CO2 [J]. Plant, Cell & Environment, 2013, 36(1): 200-212. |
112 | BRAUN H P, ZABALETA E. Carbonic anhydrase subunits of the mitochondrial NADH dehydrogenase complex (complex I) in plants[J]. Physiologia Plantarum, 2007, 129(1): 114-122. |
113 | KHURSHID G, ABBASSI A Z, KHALID M F, et al. A cyanobacterial photorespiratory bypass model to enhance photosynthesis by rerouting photorespiratory pathway in C3 plants[J]. Scientific Reports, 2020, 10: 20879. |
114 | SHEN B R, WANG L M, LIN X L, et al. Engineering a new chloroplastic photorespiratory bypass to increase photosynthetic efficiency and productivity in rice[J]. Molecular Plant, 2019, 12(2): 199-214. |
115 | Online computer library center: future agriculture project[EB/OL]. http: . |
[1] | Zhidian DIAO, Xixian WANG, Qing SUN, Jian XU, Bo MA. Advances and applications of single-cell Raman spectroscopy testing and sorting equipment [J]. Synthetic Biology Journal, 2023, 4(5): 1020-1035. |
[2] | Hui LU, Fangli ZHANG, Lei HUANG. Establishment of iBioFoundry for synthetic biology applications [J]. Synthetic Biology Journal, 2023, 4(5): 877-891. |
[3] | Zhonghu BAI, He REN, Jianqi NIE, Yang SUN. The recent progresses and applications of in-parallel fermentation technology [J]. Synthetic Biology Journal, 2023, 4(5): 904-915. |
[4] | Yujie WU, Xinxin LIU, Jianhui LIU, Kaiguang Yang, Zhigang SUI, Lihua ZHANG, Yukui ZHANG. Research progress of strain screening and quantitative analysis of key molecules based on high-throughput liquid chromatography and mass spectrometry [J]. Synthetic Biology Journal, 2023, 4(5): 1000-1019. |
[5] | Zhehui HU, Juan XU, Guangkai BIAN. Application of automated high-throughput technology in natural product biosynthesis [J]. Synthetic Biology Journal, 2023, 4(5): 932-946. |
[6] | Huan LIU, Qiu CUI. Advances and applications of ambient ionization mass spectrometry in screening of microbial strains [J]. Synthetic Biology Journal, 2023, 4(5): 980-999. |
[7] | Yannan WANG, Yuhui SUN. Base editing technology and its application in microbial synthetic biology [J]. Synthetic Biology Journal, 2023, 4(4): 720-737. |
[8] | Wanqiu LIU, Xiangyang JI, Huiling XU, Yicong LU, Jian LI. Cell-free protein synthesis system enables rapid and efficient biosynthesis of restriction endonucleases [J]. Synthetic Biology Journal, 2023, 4(4): 840-851. |
[9] | Meili SUN, Kaifeng WANG, Ran LU, Xiaojun JI. Rewiring and application of Yarrowia lipolytica chassis cell [J]. Synthetic Biology Journal, 2023, 4(4): 779-807. |
[10] | Zhi SUN, Ning YANG, Chunbo LOU, Chao TANG, Xiaojing YANG. Rational design for functional topology and its applications in synthetic biology [J]. Synthetic Biology Journal, 2023, 4(3): 444-463. |
[11] | Qilong LAI, Shuai YAO, Yuguo ZHA, Hong BAI, Kang NING. Microbiome-based biosynthetic gene cluster data mining techniques and application potentials [J]. Synthetic Biology Journal, 2023, 4(3): 611-627. |
[12] | Qiaozhen MENG, Fei GUO. Applications of foldability in intelligent enzyme engineering and design: take AlphaFold2 for example [J]. Synthetic Biology Journal, 2023, 4(3): 571-589. |
[13] | Sheng WANG, Zechen WANG, Weihua CHEN, Ke CHEN, Xiangda PENG, Fafen OU, Liangzhen ZHENG, Jinyuan SUN, Tao SHEN, Guoping ZHAO. Design of synthetic biology components based on artificial intelligence and computational biology [J]. Synthetic Biology Journal, 2023, 4(3): 422-443. |
[14] | Hailong LV, Jian WANG, Hao LV, Jin WANG, Yong XU, Dayong GU. Synthetic biology for next-generation genetic diagnostics [J]. Synthetic Biology Journal, 2023, 4(2): 318-332. |
[15] | Zhaoling SHEN, Yanling WU, Tianlei YING. Synthetic biology and viral vaccine development [J]. Synthetic Biology Journal, 2023, 4(2): 333-346. |
Viewed | ||||||
Full text |
|
|||||
Abstract |
|
|||||